NGS platform comparison, FASTQ format, Phred quality scores, and QC metrics. Reference for sequencing technology selection and read quality assessment.
/plugin marketplace add Pavel-Kravchenko/Bioinformatics
The exact command may vary by repository. Check the README on GitHub.
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| Feature | Illumina | PacBio HiFi | Oxford Nanopore |
|---|---|---|---|
| Read length | 50–300 bp | 10–25 kb | 10 kb – 1 Mb+ |
| Accuracy | ~99.9% | ~99.9% | ~99% (R10.4.1 simplex) |
| Error type | Substitutions | Random (CCS averages indels) | Homopolymer indels (R9), substitutions (R10) |
| Throughput | Up to 6 Tb/run | ~30 Gb/cell | 50–200 Gb/cell |
| Best for | WGS, RNA-seq, ChIP-seq | De novo assembly, SVs | S |
[Description truncada. Veja o README completo no GitHub.]
