Version Compatibility
Reference examples tested with: R 4.3+ with Battenberg 2.2.10+ and TitanCNA 1.40+, MEDICC2 1.0+, Python 3.10+; impute2/Beagle phasing reference panels.
Before using code patterns, verify installed versions match. If versions differ:
- R:
packageVersion('Battenberg')/'TitanCNA')then?function - CLI:
medicc2 --help - Battenberg is GitHub-only (
Wedge-lab/battenberg) and needs a 1000 Genomes impute/phasing reference and allele-counter; confirm reference data i
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