bio-crispr-screens-batch-correction

Name: bio-crispr-screens-batch-correction
Rating: 5 (1 reviews)
Author: bg-szy

Batch effect correction for CRISPR screens. Covers normalization across batches, technical replicate handling, and batch-aware analysis. Use when combining screens from multiple batches or correcting systematic technical variation.

1stars

Updated 18 days ago

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Version Compatibility

Reference examples tested with: DESeq2 1.42+, MAGeCK 0.5+, matplotlib 3.8+, numpy 1.26+, pandas 2.2+, scikit-learn 1.4+, scipy 1.12+

Before using code patterns, verify installed versions match. If versions differ:

Python: pip show <package> then help(module.function) to check signatures

If code throws ImportError, AttributeError, or TypeError, introspect the installed package and adapt the example to match the actual API rather than retrying.