bio-differential-splicing

Name: bio-differential-splicing
Rating: 5 (1 reviews)
Author: bg-szy

Detects differential alternative splicing between conditions using rMATS-turbo (BAM-based) or SUPPA2 diffSplice (TPM-based). Reports events with FDR-corrected significance and delta PSI effect sizes. Use when comparing splicing patterns between treatment groups, tissues, or disease states.

1stars

Updated 14 days ago

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Version Compatibility

Reference examples tested with: STAR 2.7.11+, pandas 2.2+

Before using code patterns, verify installed versions match. If versions differ:

Python: pip show <package> then help(module.function) to check signatures
R: packageVersion('<pkg>') then ?function_name to verify parameters
CLI: <tool> --version then <tool> --help to confirm flags

If code throws ImportError, AttributeError, or TypeError, introspect the installed package and adapt the example to

[Description truncada. Veja o README completo no GitHub.]

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