Short-Read Assembly
Assemble genomes from Illumina paired-end or single-end reads using SPAdes.
SPAdes Overview
SPAdes (St. Petersburg genome A
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bio-genome-assembly-short-read-assembly
De novo genome assembly from Illumina short reads using SPAdes. Covers bacterial, fungal, and small eukaryotic genome assembly, as well as metagenome and transcriptome assembly modes. Use when assembling genomes from Illumina reads.
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Updated 13 days ago
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