bio-longread-qc

Name: bio-longread-qc
Rating: 5 (1 reviews)
Author: bg-szy

Quality control for long-read sequencing data using NanoPlot, NanoStat, and chopper. Generate QC reports, filter reads by length and quality, and visualize read characteristics. Use when assessing ONT or PacBio run quality or filtering reads before assembly or alignment.

1stars

Updated 13 days ago

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/plugin marketplace add bg-szy/TOP-SKILLS

The exact command may vary by repository. Check the README on GitHub.

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Version Compatibility

Reference examples tested with: BioPython 1.83+, numpy 1.26+

Before using code patterns, verify installed versions match. If versions differ:

Python: pip show <package> then help(module.function) to check signatures
CLI: <tool> --version then <tool> --help to confirm flags

If code throws ImportError, AttributeError, or TypeError, introspect the installed package and adapt the example to match the actual API rather than retrying.