bio-rna-quantification-featurecounts-counting

Name: bio-rna-quantification-featurecounts-counting
Rating: 5 (1 reviews)
Author: bg-szy

Count reads per gene from aligned BAM files using Subread featureCounts. Use when processing BAM files from STAR/HISAT2 to generate gene-level counts for DESeq2/edgeR.

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Updated 14 days ago

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Version Compatibility

Reference examples tested with: DESeq2 1.42+, HISAT2 2.2.1+, STAR 2.7.11+, Subread 2.0+, edgeR 4.0+, pandas 2.2+, scanpy 1.10+

Before using code patterns, verify installed versions match. If versions differ:

Python: pip show <package> then help(module.function) to check signatures
R: packageVersion('<pkg>') then ?function_name to verify parameters
CLI: <tool> --version then <tool> --help to confirm flags

If code throws ImportError, AttributeError, or

[Description truncada. Veja o README completo no GitHub.]

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