Spatial Deconvolution
Estimate cell type composition in spatial spots using scRNA-seq references.
Required Imports
import scanpy as s
[Description truncada. Veja o README completo no GitHub.]
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bio-spatial-transcriptomics-spatial-deconvolution
Estimate cell type composition in spatial transcriptomics spots using reference-based deconvolution. Use cell2location, RCTD, SPOTlight, or Tangram to infer cell type proportions from scRNA-seq references. Use when estimating cell type composition in spatial spots.
1stars
Updated 18 days ago
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