gtars

Name: gtars
Rating: 5 (1 reviews)
Author: bg-szy

Rust-backed Python library for fast genomic token arithmetic and BED processing. High-performance BED I/O, interval set ops (intersect, merge, complement, subtract), region tokenization against a universe, universe construction. Use for preprocessing large BED collections and ML token vocabularies.

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Updated 18 days ago

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GTARS: Fast Genomic Token Arithmetic and BED File Processing

Overview

GTARS is a Python library with a Rust-backed core for high-performance genomic interval operations. It provides BED file I/O, set-theoretic interval operations (intersection, union, merge, complement, subtract), genomic region tokenization against a reference universe, and utilities for building consensus universe BED files. GTARS is designed for workflows that process hundreds to thousands of BED files efficiently, ser

[Description truncada. Veja o README completo no GitHub.]

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