interpro-database

Name: interpro-database
Rating: 5 (1 reviews)
Author: bg-szy

Query InterPro REST API for protein domain architecture, family classification, and member-DB integration. Search entries, retrieve a protein's domains, list family members, get taxonomic distribution, link to PDB. Unifies Pfam, PANTHER, PIRSF, PRINTS, PROSITE, SMART, CDD, NCBIfam. Use uniprot-protein-database for sequences; pdb-database for 3D structures.

1stars

Updated 15 days ago

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InterPro Database

Overview

InterPro is the EBI's integrated protein family, domain, and functional site database. It consolidates signatures from 13 member databases (Pfam, PANTHER, PIRSF, PRINTS, PROSITE, SMART, CDD, NCBIfam, and others) into unified InterPro entries, each describing a homologous superfamily, domain, family, repeat, or conserved site. The REST API at https://www.ebi.ac.uk/interpro/api/ is free and requires no authentication.

When to Use

Identifying all domains a

[Description truncada. Veja o README completo no GitHub.]

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