pydeseq2

Name: pydeseq2
Rating: 5 (1 reviews)
Author: LeoLin990405

Differential gene expression analysis (Python DESeq2). Identify DE genes from bulk RNA-seq counts, Wald tests, FDR correction, volcano/MA plots, for RNA-seq analysis.

1stars

Updated last month

View on GitHub ↗License: MIT

How to add

/plugin marketplace add LeoLin990405/claude-code-skills

The exact command may vary by repository. Check the README on GitHub.

For the skill author

Drop this on your repo README

Shows your skill is listed on Skillteca, generates a backlink and trackable traffic.

[![Listada na Skillteca](https://www.skillteca.com.br/api/badge/pydeseq2-leolin990405/svg)](https://www.skillteca.com.br/skills/pydeseq2-leolin990405?utm_source=badge&utm_medium=readme&utm_campaign=badge)

#python #ai #test

Related skills

See all in Pesquisa e Web →

dev-browser

60.3k

Automates browser interactions with persistent page state. Use for navigating websites, filling forms, taking screenshots, extracting web data, testing web apps, or automating browser workflows.

Pesquisa e Web#testby code-yeongyu

agent-browser

55.6k

Browser automation CLI for AI agents. Use when the user needs to interact with websites, including navigating pages, filling forms, clicking buttons, taking screenshots, extracting data, testing web apps, or automating any browser task. Triggers include requests to "open a website", "fill out a form", "click a button", "take a screenshot", "scrape data from a page", "test this web app", "login to

Pesquisa e Web#ai#testby shanraisshan

understand-chat

45.5k

Use when you need to ask questions about a codebase or understand code using a knowledge graph.

Pesquisa e Webby Lum1104

understand-dashboard

45.5k

Launch the interactive web dashboard to visualize a codebase's knowledge graph.

Pesquisa e Webby Lum1104

Category alert

Get new Pesquisa e Web skills every Monday

One short email with only the new Pesquisa e Web skills. 4 minutes of reading, no spam, unsubscribe with one click.

You confirm your email on the first send. No spam. Unsubscribe with one click.

PyDESeq2

Overview

PyDESeq2 is a Python implementation of DESeq2 for differential expression analysis with bulk RNA-seq data. Design and execute complete workflows from data loading through result interpretation, including single-factor and multi-factor designs, Wald tests with multiple testing correction, optional apeGLM shrinkage, and integration with pandas and AnnData.

When to Use This Skill

This skill should be used when:

Analyzing bulk RNA-seq count data for differential expre

[Description truncada. Veja o README completo no GitHub.]

ShareX LinkedIn

Comments · No comments

No comments yet. Be the first.