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postgres-migrations
Comprehensive guide to PostgreSQL migrations - common errors, generated columns, full-text search, indexes, idempotent migrations, and best practices for database schema changes
postgresql-table-design
Design a PostgreSQL-specific schema. Covers best-practices, data types, indexing, constraints, performance patterns, and advanced features
pyhealth
Comprehensive healthcare AI toolkit for developing, testing, and deploying machine learning models with clinical data. This skill should be used when working with electronic health records (EHR), clinical prediction tasks (mortality, readmission, drug recommendation), medical coding systems (ICD, NDC, ATC), physiological signals (EEG, ECG), healthcare datasets (MIMIC-III/IV, eICU, OMOP), or implem
pyopenms
Python interface to OpenMS for mass spectrometry data analysis. Use for LC-MS/MS proteomics and metabolomics workflows including file handling (mzML, mzXML, mzTab, FASTA, pepXML, protXML, mzIdentML), signal processing, feature detection, peptide identification, and quantitative analysis. Apply when working with mass spectrometry data, analyzing proteomics experiments, or processing metabolomics da
rdkit
Cheminformatics toolkit for fine-grained molecular control. SMILES/SDF parsing, descriptors (MW, LogP, TPSA), fingerprints, substructure search, 2D/3D generation, similarity, reactions. For standard workflows with simpler interface, use datamol (wrapper around RDKit). Use rdkit for advanced control, custom sanitization, specialized algorithms.
relational-database-mcp-cloudbase
This is the required documentation for agents operating on the CloudBase Relational Database. It lists the only four supported tools for running SQL and managing security rules. Read the full content to understand why you must NOT use standard Application SDKs and how to safely execute INSERT, UPDATE, or DELETE operations without corrupting production data.
scvi-tools
This skill should be used when working with single-cell omics data analysis using scvi-tools, including scRNA-seq, scATAC-seq, CITE-seq, spatial transcriptomics, and other single-cell modalities. Use this skill for probabilistic modeling, batch correction, dimensionality reduction, differential expression, cell type annotation, multimodal integration, and spatial analysis tasks.
SDK Analytics Installer
Use this skill when the user asks to install, configure, or set up @dotcms/analytics, sdk-analytics, analytics SDK, add analytics tracking, or mentions installing analytics in Next.js or React projects
sql-translation
Guide for adding SQL function translations to dbplyr backends. Use when implementing new database-specific R-to-SQL translations for functions like string manipulation, date/time, aggregates, or window functions.
sql-optimization-patterns
Master SQL query optimization, indexing strategies, and EXPLAIN analysis to dramatically improve database performance and eliminate slow queries. Use when debugging slow queries, designing database schemas, or optimizing application performance.
sql-research
Guide for researching SQL syntax and behavior for database backends. Use when you need to research how a SQL function, command, or feature works in a specific database before implementing it in dbplyr.
sql
Run SQL queries against the WordPress development database. Use when querying database tables, inspecting Simple History events, checking WordPress data, or debugging database issues.