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Claude Code configuration with 42 specialized agents, 33 skills, 28 commands, and a hook system for development best practices

Claude Code configuration with 42 specialized agents, 33 skills, 28 commands, and a hook system for development best practices

Use this skill during Phase 7 after a successful deployment to generate or update monitoring, logging, alerting, and observability artifacts that catch exceptions and issues in the deployed code. Produces platform-neutral scripts when no observability platform is configured, and integrates with Grafana/Datadog/CloudWatch via MCP when configured. Trigger after deploy, or when the user says "add mon

Comprehensive brainstorming workflow for turning any app idea into a clear, validated, buildable brief. Two paths: personal project (8 steps) and client/business project (13 steps). Fast path for fully-formed ideas. Detects agentic/AI projects and routes to agent: before architect:. Pre-write quality check ensures BRIEF.md has specific users, measurable success criteria, explicit non-goals, and a

Robust error handling for bioinformatics pipelines — custom exception hierarchy, try/except/else/finally, exception chaining, strict FASTA parsing.

NumPy for bioinformatics covers vectorized operations, broadcasting for expression matrices, PWM construction, sliding-window GC with cumsum, and normalization recipes.

Transform academic papers into in-depth technical articles with multiple writing style options. Use the MinerU Cloud API for high-precision PDF parsing, automatically extracting images, tables, and formulas. Optional formula explanations and GitHub code analysis, generating Markdown and HTML formats.

This skill should be used when the user asks to 'reflect on this session', 'save insights to memory', 'capture what we learned', 'commit this to memory', 'save decisions to Basic Memory', 'write up what we did', 'preserve what we found', 'save insights from this conversation', 'save what was discovered', 'capture session learnings', 'session reflection'. Reviews the current conversation, extracts

Use when the user wants to search, query, insert, upsert, get, or delete vectors in a Milvus collection.

This skill should be used when the user asks to audit, health-check, or structurally validate one or more SPECIFIC named notes or a bounded topic cluster — 'audit these notes', 'check this note for orphans or broken links', 'fourth-wall check on [note]', 'validate the structure of [note]', 'spot-check [note]'. Runs a read-only audit inline. NOT for fixing issues (use /knowledge-maintain), NOT for

Use when the user wants to create, list, describe, or drop indexes on Milvus collections.

Use when the user wants to check cluster status, collection statistics, load states, or get an overview of their Zilliz Cloud resources.