Explore skills

Execute implementation plans. Lead dispatches bare worker subagents per task, invokes gigo:verify after each, tracks progress via checkpoints. Falls back to inline if subagents unavailable. Agent teams available as experimental opt-in. Use when you have an approved plan from gigo:blueprint.

Morning planning conversation. Loads overnight context, inbox, landscape, extracts structured check-in, surfaces priorities, writes daily ops files, syncs to Notion.

Session retrospective — reads Claude Code telemetry and turns friction into project improvements. Analyzes one session or aggregates recent sessions. Produces proposals, not reports. Use gigo:retro.

Guided artist onboarding for independent musicians. Use when a musician wants to set up, clarify, refresh, or document the creative and promo context for an artist project before making social posts, reels, lyric videos, visualizers, show recaps, campaign assets, brand kits, merch concepts, bios, captions, or release materials. This skill interviews conversationally, one question at a time, then w

Resume an interrupted session. Reads the active increment, assesses progress, and picks up where the last session left off.

Bisulfite sequencing read alignment using Bismark with bowtie2/hisat2. Handles genome preparation and produces BAM files with methylation information. Use when aligning WGBS, RRBS, or other bisulfite-converted sequencing reads to a reference genome.

De novo genome assembly from Illumina short reads using SPAdes. Covers bacterial, fungal, and small eukaryotic genome assembly, as well as metagenome and transcriptome assembly modes. Use when assembling genomes from Illumina reads.

Assembles haplotype-resolved diploid and telomere-to-telomere (T2T) genomes from PacBio HiFi reads with hifiasm (HiFi-only, Hi-C, or trio phasing) and verkko (HiFi + ultralong ONT for T2T), extracting contigs from GFA and routing phasing QC to k-mer/trio metrics. Covers why a primary assembly is a haplotype mosaic that exists in no cell, partial-vs-full phasing (the .bp. vs .dip. filename conventi

Polish genome assemblies to reduce errors using short reads (Pilon), long reads (Racon), or ONT-specific tools (medaka). Essential for improving long-read assembly accuracy. Use when improving assembly accuracy with polishing tools.

Speed read Claude's responses at 600+ WPM using RSVP with Spritz-style ORP highlighting.

Work with FASTQ quality scores using Biopython. Use when analyzing read quality, filtering by quality, trimming low-quality bases, or generating quality reports.

Mark and remove PCR/optical duplicates using samtools fixmate and markdup. Use when preparing alignments for variant calling or when duplicate reads would bias analysis.