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spatial-transcriptomics-analysis

1

Automated analysis pipeline for Spatial Transcriptomics (Visium, Xenium) integrating histology and gene expression.

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spatial-transcriptomics-agent

1

Spatial analyst

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strategic-compact

1

Suggests manual context compaction at logical intervals to preserve context through task phases rather than arbitrary auto-compaction.

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story-pitch

1

Craft effective story pitches for different publication types and formats. Use when pitching to editors, preparing query letters, or developing story angles. Includes templates for daily news, features, investigations, op-eds, and freelance queries.

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subagent-driven-development

1

Use when executing implementation plans with independent tasks in the current session

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trialgpt-matching

1

Trial shortlist

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struct-predictor

1

Local protein structure prediction with AlphaFold, Boltz, or Chai. Compare predicted structures, compute RMSD, visualise 3D models.

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tcr-repertoire-analysis-agent

1

AI-powered T-cell receptor repertoire analysis for cancer diagnosis, immunotherapy response prediction, and therapeutic TCR selection using deep learning and multi-layer ML approaches.

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tcm-constitution-analyzer

1

分析中医体质数据、识别体质类型、评估体质特征,并提供个性化养生建议。支持与营养、运动、睡眠等健康数据的关联分析。

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tcell-exhaustion-analysis-agent

1

AI-powered analysis of T-cell exhaustion states, epigenetic scarring, stem-like T-cell populations, and checkpoint blockade response prediction in cancer immunotherapy.

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time-resolved-cryoem-agent

1

AI-powered time-resolved cryo-EM analysis for capturing protein dynamics, drug-binding kinetics, and conformational transitions for dynamics-based drug discovery.

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tme-immune-profiling-agent

1

Comprehensive AI-powered tumor microenvironment immune profiling integrating bulk deconvolution, single-cell analysis, and spatial transcriptomics for immunotherapy biomarker discovery.

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