Version Compatibility
Reference examples tested with: sra-tools 3.0+ (fasterq-dump, prefetch, vdb-validate, vdb-config), pysradb 2.2+, ENA portal API 2.0+
Before using code patterns, verify installed versions match. If versions differ:
- CLI:
fasterq-dump --version,prefetch --version - Python:
pip show pysradb
If a flag is unrecognized or behavior changes, run <tool> --help and adapt.
SRA Data
"Download FASTQ from this SRA accession" -> Two paths exist in 2026: the **SRA t
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