Version Compatibility
Reference examples tested with: GATK 4.5+, bcftools 1.19+
Before using code patterns, verify installed versions match. If versions differ:
- CLI:
<tool> --versionthen<tool> --helpto confirm flags
If code throws ImportError, AttributeError, or TypeError, introspect the installed package and adapt the example to match the actual API rather than retrying.
Joint Calling
"Joint genotype my cohort samples" → Combine per-sample gVCFs into a single cohort calls
[Description truncada. Veja o README completo no GitHub.]