From Sequence to Discovery: Integrative Bioinformatics Pipeline
Pipeline Overview
Unknown DNA → QC/clean → BLAST → MSA → Phylogeny → Structure → Domains → GO/Pathways → Figures → Report
Setup
import numpy as np, pandas as pd, matplotlib.pyplot as plt, seaborn as sns
from Bio import SeqIO, AlignIO, Entrez, Phylo
from Bio.Seq import Seq
from Bio.SeqRecord import SeqRecord
from Bio.SeqUtils import gc_fraction
from Bio.Blast import NCBIWWW, NCBIXML
from Bio.Phylo.TreeCo
[Description truncada. Veja o README completo no GitHub.]
