Analyze genome collinearity and syntenic blocks using MCScanX, SyRI, and JCVI for comparative genomics. Detect conserved gene order, chromosomal rearrangements, and whole-genome duplications. Use when comparing genome structure between species or identifying conserved genomic regions.
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Provenance: Authenticated by MD BABU MIA
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Synteny Analysis
MCScanX Workflow
'''Synteny analysis with MCScanX and visualization'''
import subprocess
import pandas as pd
from co
[Description truncada. Veja o README completo no GitHub.]
