Version Compatibility
Reference examples tested with: R 4.3+ with scarHRD 0.1.1+, sequenza 3.0+ (allele-specific input); HRDetect / CHORD as their respective R packages where whole-genome data is available.
Before using code patterns, verify installed versions match. If versions differ:
- R:
packageVersion('scarHRD')then?scar_scoreto confirm arguments - scarHRD is GitHub-only (
sztup/scarHRD); install withremotes::install_github
scarHRD consumes allele-specific copy number — a S
[Description truncada. Veja o README completo no GitHub.]