bio-long-read-sequencing-clair3-variants

Name: bio-long-read-sequencing-clair3-variants
Rating: 5 (1 reviews)
Author: bg-szy

Deep learning-based variant calling from long reads using Clair3 for SNPs and small indels. Use when calling germline variants from ONT or PacBio alignments, particularly when high accuracy is needed for clinical or research applications.

1stars

Updated 13 days ago

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Version Compatibility

Reference examples tested with: DeepVariant 1.6+, Entrez Direct 21.0+, bcftools 1.19+, minimap2 2.26+

Before using code patterns, verify installed versions match. If versions differ:

Python: pip show <package> then help(module.function) to check signatures
CLI: <tool> --version then <tool> --help to confirm flags

If code throws ImportError, AttributeError, or TypeError, introspect the installed package and adapt the example to match the actual API rather t

[Description truncada. Veja o README completo no GitHub.]

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