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End-to-end proteomics workflow from MaxQuant output to differential protein abundance. Orchestrates data import, normalization, imputation, and statistical testing with MSstats or limma. Use when processing mass spectrometry proteomics.
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COPYRIGHT NOTICE
This file is part of the "Universal Biomedical Skills" project.
Copyright (c) 2026 MD BABU MIA, PhD <md.babu.mia@mssm.edu>
All Rights Reserved.
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This code is proprietary and confidential.
Unauthorized copying of this file, via any medium is strictly prohibited.
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Provenance: Authenticated by MD BABU MIA
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Proteomics Pipeline
Pipeline Overview
Raw MS Data (mzML) ──> MaxQuant/DIA-NN ──> proteinGroups.txt
[Description truncada. Veja o README completo no GitHub.]
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