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Molecular biology toolkit: sequence manipulation, FASTA/GenBank/PDB I/O, NCBI Entrez, BLAST automation, pairwise/MSA alignment, Bio.PDB, phylogenetic trees. Use for batch processing, custom pipelines, format conversion, PubMed/GenBank queries. For quick gene lookups use gget; for multi-service REST APIs use bioservices.
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Ler descrição completa Recolher descrição Biopython: Computational Molecular Biology Toolkit
Overview
Biopython is the standard open-source Python library for computational molecular biology, providing modular APIs for sequence handling, biological file parsing, NCBI database access, BLAST searches, protein structure analysis, and phylogenetics. It supports Python 3 and requires NumPy.
When to Use
Parse and convert biological file formats (FASTA, GenBank, FASTQ, PDB, mmCIF, PHYLIP) Fetch sequences or publications from NC [Description truncada. Veja o README completo no GitHub.]
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