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gtars

High-performance toolkit for genomic interval analysis in Rust with Python bindings. Use when working with genomic regions, BED files, coverage tracks, overlap detection, tokenization for ML models, or fragment analysis in computational genomics and machine learning applications.

2estrelas
Atualizado há 4 meses

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Gtars: Genomic Tools and Algorithms in Rust

Overview

Gtars is a high-performance Rust toolkit for manipulating, analyzing, and processing genomic interval data. It provides specialized tools for overlap detection, coverage analysis, tokenization for machine learning, and reference sequence management.

Use this skill when working with:

  • Genomic interval files (BED format)
  • Overlap detection between genomic regions
  • Coverage track generation (WIG, BigWig)
  • Genomic ML preprocessing and

[Description truncada. Veja o README completo no GitHub.]

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