Linux, Git & Bash for Bioinformatics
When to Use
- Processing FASTA/FASTQ/BAM/VCF files from the command line
- Setting up reproducible analysis projects with git
- Writing batch pipeline scripts that loop over samples
Shell Quick Reference
Navigation & File Operations
| Command | Purpose | |---------|---------| | ls -lah | Long listing with human-readable sizes | | mkdir -p project/{data/{raw,processed},results,scripts} | Nested dirs via brace expansion | | `find . -name "*.f
[Description truncada. Veja o README completo no GitHub.]