Build and analyze phylogenetic trees using MAFFT (multiple alignment), IQ-TREE 2 (maximum likelihood), and FastTree (fast NJ/ML). Visualize with ETE3 or FigTree. For evolutionary analysis, microbial genomics, viral phylodynamics, protein family analysis, and molecular clock studies.
Receba novas skills de Design e Frontend toda segunda
1 email curto, só com as skills novas de Design e Frontend. 4 minutos de leitura, sem spam, cancela com 1 clique.
Você confirma o email no primeiro envio. Sem spam. Cancela com 1 clique.
Ler descrição completaRecolher descrição
Phylogenetics
Overview
Phylogenetic analysis reconstructs the evolutionary history of biological sequences (genes, proteins, genomes) by inferring the branching pattern of descent. This skill covers the standard pipeline:
MAFFT — Multiple sequence alignment
IQ-TREE 2 — Maximum likelihood tree inference with model selection
FastTree — Fast approximate maximum likelihood (for large datasets)
ETE3 — Python library for tree manipulation and visualization
**Instal
[Description truncada. Veja o README completo no GitHub.]
