Single-cell CellPhoneDB communication mapping
Overview
Apply this skill when a user wants to quantify ligand–receptor communication between annotated single-cell populations and display the networks with CellChatViz. It distils the workflow from [t_cellphonedb.ipynb](../../omicverse_guide/docs/Tutorials-single/t_cellphonedb.ipynb), which analyses EVT trophoblast data.
Instructions
- Prepare the environment
- Use an environment with
omicverse>=0.2,scanpy,anndata, `pa
[Description truncada. Veja o README completo no GitHub.]