Dados e Análise
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bio-pathway-reactome
Reactome pathway enrichment using ReactomePA package. Use when analyzing gene lists against Reactome's curated peer-reviewed pathway database. Performs over-representation analysis and GSEA with visualization and pathway hierarchy exploration.
vaex
Use this skill for processing and analyzing large tabular datasets (billions of rows) that exceed available RAM. Vaex excels at out-of-core DataFrame operations, lazy evaluation, fast aggregations, efficient visualization of big data, and machine learning on large datasets. Apply when users need to work with large CSV/HDF5/Arrow/Parquet files, perform fast statistics on massive datasets, create vi
drug-labels-search
Search FDA drug labels with natural language queries. Official drug information, indications, and safety data via Valyu.
bio-expression-matrix-counts-ingest
Load gene expression count matrices from various formats including CSV, TSV, featureCounts, Salmon, kallisto, and 10X. Use when importing quantification results for downstream analysis.
py-async-patterns
Async/await patterns for FastAPI and SQLAlchemy. Use when working with async code, database sessions, concurrent operations, or debugging async issues in Python.
bio-clinical-databases-somatic-signatures
Extract and analyze mutational signatures from somatic variants using SigProfiler or MutationalPatterns to characterize mutagenic processes. Use when identifying DNA damage mechanisms or etiology in cancer genomes.
visual-explainer
Generate self-contained HTML pages that visually explain systems, data stories, investigations, editorial workflows, and code changes. Use when the user asks for a diagram, architecture overview, diff review, plan review, project recap, source map, comparison table, timeline, or any visual explanation of technical or editorial concepts. Also use proactively when about to render a complex ASCII tab
maxhub-wechat
API key for MaxHub data APIs. Get one at https://www.aconfig.cn
analysis-tshark
Analisador de protocolo de rede e ferramenta de captura de pacotes que utiliza a interface de linha de comando do Wireshark para análise de tráfego, investigações de segurança e exame forense, incluindo detecção de malware e extração de dados sensíveis.
ctx-insight
Abre o painel de análise Insight do modo de contexto no navegador, exibindo métricas pessoais como atividade da sessão, uso de ferramentas e foco do projeto, além de insights acionáveis. A primeira execução instala dependências, e as subsequentes abrem instantaneamente.
gate-dex-market
"Gate Wallet market data and token info queries. K-line,
postgres-patterns
PostgreSQL patterns for reviewing migrations and writing efficient queries. Use when reviewing Alembic migrations, optimizing queries, or debugging database issues.