Desenvolvimento

Detect introgression and admixture between species or populations using Dsuite (Malinsky 2021 fast D-statistics), Patterson's D / ABBA-BABA test (Green 2010; Durand 2011), f4-ratio and f-branch statistic (Malinsky 2018), TreeMix (Pickrell & Pritchard 2012), HyDe (Blischak 2018), QuIBL (Edelman 2019), sprime (Browning 2018), Twisst (Martin 2017), PhyloNet (Solis-Lemus 2017) for explicit phylogeneti

Executa testes e corrige sistematicamente todos os testes com falha usando agrupamento inteligente de erros. Utilize quando o usuário pede para corrigir testes com falha, menciona falhas de teste, executa um conjunto de testes e ocorrem falhas, ou solicita que os testes passem.

Interview the user relentlessly about a plan or design until reaching shared understanding, resolving each branch of the decision tree. Use when user wants to stress-test a plan, get grilled on their design, or mentions "grill me".

Chronicle oferece um fluxo de trabalho completo para rastrear o trabalho de desenvolvimento, incluindo gravação de sessão, rastreamento Git, sumarização por IA e documentação no Obsidian. Funciona com comandos CLI (portátil) ou ferramentas MCP (mais rápido), ideal para iniciar novas sessões de desenvolvimento ou gerenciamento abrangente de projetos.

Guide technical communication for software developers. Covers email structure, team messaging etiquette, meeting agendas, and adapting messages for technical vs non-technical audiences. Use when drafting professional messages, preparing meeting communications, or improving written communication.

Provides Playwright test patterns for resilient locators, Page Object Models, fixtures, web-first assertions, and network mocking. Must use when writing or modifying Playwright tests (.spec.ts, .test.ts files with @playwright/test imports).

End-to-end GWAS workflow from VCF to association results. Covers PLINK QC, population structure correction, and association testing for case-control or quantitative traits. Use when running genome-wide association studies.

Capture an existing web platform's visual design and generate feature prototypes that match its style. Use when a product manager or developer wants to prototype a new feature for an existing platform.

Upgrade gstack to the latest version. Detects global vs vendored install, runs the upgrade, and shows what's new. Use when asked to "upgrade gstack", "update gstack", or "get latest version". Voice triggers (speech-to-text aliases): "upgrade the tools", "update the tools", "gee stack upgrade", "g stack upgrade".

Generate reverse complements and complements of DNA/RNA sequences using Biopython. Use when working with opposite strands, primer design, or converting between template and coding strands.

Kotlin testing patterns with Kotest, MockK, coroutine testing, property-based testing, and Kover coverage. Follows TDD methodology with idiomatic Kotlin practices.

Use when the user wants a task done well rather than fast. Rewrites the user's rough request into a sharp prompt using kanso-prompting rules, asks targeted questions only when load-bearing detail is missing, then executes the rewritten task inline with kanso-principles loaded so any code produced follows the anti-dilution rules.