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spatial-transcriptomics-analysis
Automated analysis pipeline for Spatial Transcriptomics (Visium, Xenium) integrating histology and gene expression.
spatial-transcriptomics-agent
Spatial analyst
strategic-compact
Suggests manual context compaction at logical intervals to preserve context through task phases rather than arbitrary auto-compaction.
story-pitch
Craft effective story pitches for different publication types and formats. Use when pitching to editors, preparing query letters, or developing story angles. Includes templates for daily news, features, investigations, op-eds, and freelance queries.
subagent-driven-development
Use when executing implementation plans with independent tasks in the current session
trialgpt-matching
Trial shortlist
struct-predictor
Local protein structure prediction with AlphaFold, Boltz, or Chai. Compare predicted structures, compute RMSD, visualise 3D models.
tcr-repertoire-analysis-agent
AI-powered T-cell receptor repertoire analysis for cancer diagnosis, immunotherapy response prediction, and therapeutic TCR selection using deep learning and multi-layer ML approaches.
tcm-constitution-analyzer
分析中医体质数据、识别体质类型、评估体质特征,并提供个性化养生建议。支持与营养、运动、睡眠等健康数据的关联分析。
tcell-exhaustion-analysis-agent
AI-powered analysis of T-cell exhaustion states, epigenetic scarring, stem-like T-cell populations, and checkpoint blockade response prediction in cancer immunotherapy.
time-resolved-cryoem-agent
AI-powered time-resolved cryo-EM analysis for capturing protein dynamics, drug-binding kinetics, and conformational transitions for dynamics-based drug discovery.
tme-immune-profiling-agent
Comprehensive AI-powered tumor microenvironment immune profiling integrating bulk deconvolution, single-cell analysis, and spatial transcriptomics for immunotherapy biomarker discovery.