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2.905 skills encontradas
scrna-qc
Execute the MAD-based single-cell RNA-seq QC workflow (scripts + Python API) to filter low-quality cells and emit reports plus filtered AnnData files.
aeon
scikit-learn compatible Python toolkit for time series ML: classify, cluster, regress, segment, transform with 30+ algorithms (ROCKET, InceptionTime, KNN-DTW, HIVE-COTE, WEASEL). Handles panel, multivariate, and unequal-length series. Maintained successor to sktime. Alternatives: sktime (larger ecosystem), tslearn (fewer algorithms), catch22 (features only).
bioservices
Esta é a principal ferramenta Python para mais de 40 serviços de bioinformática, ideal para fluxos de trabalho multi-banco de dados como UniProt, KEGG e PubChem. Oferece uma API unificada para consultas, mapeamento de IDs e análise de vias, com controle REST direto disponível através de skills de banco de dados individuais.
astropy
Uma biblioteca Python abrangente para astronomia e astrofísica, ideal para trabalhar com dados astronômicos, incluindo coordenadas celestes, unidades físicas, arquivos FITS, cálculos cosmológicos e análise de dados.
bio-alignment-msa-parsing
Parse and analyze multiple sequence alignments using Biopython. Extract sequences, identify conserved regions, analyze gaps, work with annotations, and manipulate alignment data for downstream analysis. Use when parsing or manipulating multiple sequence alignments.
networkx
Comprehensive toolkit for creating, analyzing, and visualizing complex networks and graphs in Python. Use when working with network/graph data structures, analyzing relationships between entities, computing graph algorithms (shortest paths, centrality, clustering), detecting communities, generating synthetic networks, or visualizing network topologies. Applicable to social networks, biological net
pytm
Python-based threat modeling using pytm library for programmatic STRIDE analysis, data flow diagram generation, and automated security threat identification. Use when: (1) Creating threat models programmatically using Python code, (2) Generating data flow diagrams (DFDs) with automatic STRIDE threat identification, (3) Integrating threat modeling into CI/CD pipelines and shift-left security practi
python-cli-patterns
CLI application patterns for Python. Triggers on: cli, command line, typer, click, argparse, terminal, rich, console, terminal ui.
fullstack-dev
Guia de arquitetura de backend full-stack e integração frontend-backend. Acionado ao desenvolver apps full-stack, APIs REST, serviços de backend, ou apps como todo, CRUD, em tempo real e chat, com tecnologias como Express + React, Next.js, Node.js, Python ou Go.
py-async-patterns
Async/await patterns for FastAPI and SQLAlchemy. Use when working with async code, database sessions, concurrent operations, or debugging async issues in Python.
bio-reverse-complement
Generate reverse complements and complements of DNA/RNA sequences using Biopython. Use when working with opposite strands, primer design, or converting between template and coding strands.
uvicorn
ASGI server for Python web applications - Fast, production-ready server for async frameworks