Explorar skills

Pythonic wrapper around RDKit with simplified interface and sensible defaults. Preferred for standard drug discovery including SMILES parsing, standardization, descriptors, fingerprints, clustering, 3D conformers, parallel processing. Returns native rdkit.Chem.Mol objects. For advanced control or custom parameters, use rdkit directly.

Primary Python tool for 40+ bioinformatics services. Preferred for multi-database workflows: UniProt, KEGG, ChEMBL, PubChem, Reactome, QuickGO. Unified API for queries, ID mapping, pathway analysis. For direct REST control, use individual database skills (uniprot-database, kegg-database).

Creates bauplan data pipeline projects with SQL and Python models. Use when starting a new pipeline, defining DAG transformations, writing models, or setting up bauplan project structure from scratch.

Azure Monitor OpenTelemetry Distro for Python. Use for one-line Application Insights setup with auto-instrumentation. Triggers: "azure-monitor-opentelemetry", "configure_azure_monitor", "Application Insights", "OpenTelemetry distro", "auto-instrumentation".

Python SDK for inference.sh - run AI apps, build agents, and integrate with 150+ models. Package: inferencesh (pip install inferencesh). Supports sync/async, streaming, file uploads. Build agents with template or ad-hoc patterns, tool builder API, skills, and human approval. Use for: Python integration, AI apps, agent development, RAG pipelines, automation. Triggers: python sdk, inferencesh, pip i

Use when implementing JWT authentication in FastAPI or Python projects. Triggers for: token generation, verification middleware, current user extraction, access token creation, token decoding, or role-based auth. NOT for: OAuth2 provider setup, OpenID Connect, or non-Python backends.

Differential gene expression analysis (Python DESeq2). Identify DE genes from bulk RNA-seq counts, Wald tests, FDR correction, volcano/MA plots, for RNA-seq analysis.

Execute Python code in a safe sandboxed environment via [inference.sh](https://inference.sh). Pre-installed: NumPy, Pandas, Matplotlib, requests, BeautifulSoup, Selenium, Playwright, MoviePy, Pillow, OpenCV, trimesh, and 100+ more libraries. Use for: data processing, web scraping, image manipulation, video creation, 3D model processing, PDF generation, API calls, automation scripts. Triggers: pyth

Chunked N-D arrays for cloud storage. Compressed arrays, parallel I/O, S3/GCS integration, NumPy/Dask/Xarray compatible, for large-scale scientific computing pipelines.

Comprehensive Python programming guidelines based on Google's Python Style Guide. Use when Claude needs to write Python code, review Python code for style issues, refactor Python code, or provide Python programming guidance. Covers language rules (imports, exceptions, type annotations), style rules (naming conventions, formatting, docstrings), and best practices for clean, maintainable Python code

Chunked N-D arrays for cloud storage. Compressed arrays, parallel I/O, S3/GCS integration, NumPy/Dask/Xarray compatible, for large-scale scientific computing pipelines.

Python-based threat modeling using pytm library for programmatic STRIDE analysis, data flow diagram generation, and automated security threat identification. Use when: (1) Creating threat models programmatically using Python code, (2) Generating data flow diagrams (DFDs) with automatic STRIDE threat identification, (3) Integrating threat modeling into CI/CD pipelines and shift-left security practi