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CI/CD pipelines, containerization, Kubernetes, and infrastructure as code patterns

Import transcript-level quantifications from Salmon/kallisto into R for gene-level analysis with DESeq2/edgeR using tximport or tximeta. Use when importing transcript counts into R for DESeq2/edgeR.

CEO/founder-mode plan review. Rethink the problem, find the 10-star product, challenge premises, expand scope when it creates a better product. Four modes: SCOPE EXPANSION (dream big), SELECTIVE EXPANSION (hold scope + cherry-pick expansions), HOLD SCOPE (maximum rigor), SCOPE REDUCTION (strip to essentials). Use when asked to "think bigger", "expand scope", "strategy review", "rethink this", or "

Um framework web empresarial aprimorado baseado em gin-gonic/gin, que oferece recursos prontos para uso como autenticação JWT, comunicação em tempo real SSE, gerenciamento de cache e geração de documentação OpenAPI. Ele abrange capacidades completas de desenvolvimento, incluindo configuração de rotas opcionais, formato de resposta unificado, gerenciamento de middleware, reforço de segurança e otimização de desempenho.

JavaScript/TypeScript SDK for inference.sh - run AI apps, build agents, integrate 150+ models. Package: @inferencesh/sdk (npm install). Full TypeScript support, streaming, file uploads. Build agents with template or ad-hoc patterns, tool builder API, skills, human approval. Use for: JavaScript integration, TypeScript, Node.js, React, Next.js, frontend apps. Triggers: javascript sdk, typescript sdk

Systematically verifies suspected security bugs to eliminate false positives. Produces TRUE POSITIVE or FALSE POSITIVE verdicts with documented evidence for each bug.

Calculate linkage disequilibrium statistics (r², D'), perform LD pruning for population structure analysis, identify haplotype blocks, and visualize LD patterns using PLINK, scikit-allel, and LDBlockShow. Use when calculating LD or pruning variants.

Mine ALL past Claude conversations to build a living 'User Manual About You'. Extract writing style, business context, goals, preferences, and patterns. Make all other skills smarter with context.

Master monorepo management with Turborepo, Nx, and pnpm workspaces to build efficient, scalable multi-package repositories with optimized builds and dependency management. Use when setting up monorepos, optimizing builds, or managing shared dependencies.

Comprehensive PDF manipulation toolkit for extracting text and tables, creating new PDFs, merging/splitting documents, and handling forms. When Claude needs to fill in a PDF form or programmatically process, generate, or analyze PDF documents at scale.

Perform a non-destructive cross-artifact consistency and quality analysis across spec.md, plan.md, and tasks.md after task generation.

Render videos from React/Remotion component code via inference.sh. Pass TSX code, get MP4. Supports all Remotion APIs: useCurrentFrame, useVideoConfig, spring, interpolate, AbsoluteFill, Sequence. Configurable resolution, FPS, duration, codec. Use for: programmatic video generation, animated graphics, motion design, data-driven videos, React animations to video. Triggers: remotion, render video fr