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Software Composition Analysis (SCA) using Synopsys Black Duck for identifying open source vulnerabilities, license compliance risks, and supply chain security threats with CVE, CWE, and OWASP framework mapping. Use when: (1) Scanning dependencies for known vulnerabilities and security risks, (2) Analyzing open source license compliance and legal risks, (3) Identifying outdated or unmaintained depe

Read an existing research outline and fan out independent background agents to deeply research each item, producing one structured JSON per item against the shared field schema. Resumable, batched, with output disabled per agent (each agent has its explicit output file). Use when `outline.yaml` + `fields.yaml` from `/research-outline` are in place and you want to parallelise the per-item investiga

Master error handling patterns across languages including exceptions, Result types, error propagation, and graceful degradation to build resilient applications. Use when implementing error handling, designing APIs, or improving application reliability.

Interactive database query builder for generating optimized SQL and NoSQL queries.

Loop 2 of the Three-Loop Integrated Development System. META-SKILL that dynamically compiles Loop 1 plans into agent+skill execution graphs. Queen Coordinator selects optimal agents from 86-agent registry and assigns skills (when available) or custom instructions. 9-step swarm with theater detection and reality validation. Receives plans from research-driven-planning, feeds to cicd-intelligent-rec

Stores and operates on sparse expression matrices for single-cell and large bulk RNA-seq, covering dgCMatrix/dgRMatrix/dgTMatrix when-each-is-fast, the dgCMatrix (CSC, R) <-> CSR (Python) implicit transpose, AnnData (cells-rows) <-> SingleCellExperiment (cells-cols) orientation flip, HDF5/h5ad vs Zarr cloud-native shift, HDF5SummarizedExperiment + DelayedArray for out-of-memory bulk, scanpy backed

Quantify homologous recombination deficiency (HRD) from tumor copy number using the three genomic-scar metrics — loss of heterozygosity (LOH), large-scale state transitions (LST), and telomeric allelic imbalance (TAI) — with scarHRD, and via the whole-genome HRDetect and CHORD models. Covers the genomic instability score, the PARP-inhibitor clinical context, whole-genome-doubling correction, and t

Picks random winners from lists, spreadsheets, or Google Sheets for giveaways, raffles, and contests. Ensures fair, unbiased selection with transparency.

Esta skill é para solicitações relacionadas a execução de comandos de pentest, escaneamento com Nmap, uso de exploits Metasploit, quebra de senhas com Hydra ou John, escaneamento de vulnerabilidades web com Nikto, enumeração de redes, ou referências essenciais de comandos de pentest.

Generate comprehensive, maintainable unit tests across languages with strong coverage and edge case focus.

Automate changelog generation from commits, PRs, and releases following Keep a Changelog format. Use when setting up release workflows, generating release notes, or standardizing commit conventions.

Comprehensive variant filtering including GATK VQSR, hard filters, bcftools expressions, and quality metric interpretation for SNPs and indels. Use when filtering variants using GATK best practices.