Dados e Análise
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neuropixels-analysis
Neuropixels neural recording analysis. Load SpikeGLX/OpenEphys data, preprocess, motion correction, Kilosort4 spike sorting, quality metrics, Allen/IBL curation, AI-assisted visual analysis, for Neuropixels 1.0/2.0 extracellular electrophysiology. Use when working with neural recordings, spike sorting, extracellular electrophysiology, or when the user mentions Neuropixels, SpikeGLX, Open Ephys, Ki
hmdb-database
Acesse o Banco de Dados do Metaboloma Humano (mais de 220 mil metabólitos) para pesquisar por nome/ID/estrutura e recuperar propriedades químicas, dados de biomarcadores, espectros de RMN/EM e vias metabólicas para metabolômica e identificação.
bio-long-read-sequencing-nanopore-methylation
Calls DNA methylation from Oxford Nanopore sequencing data using signal-level analysis. Use when detecting 5mC or 6mA modifications directly from nanopore reads without bisulfite conversion.
global-validation
Implement server-side validation with allowlists, specific error messages, type checking, and sanitization to prevent security vulnerabilities and ensure data integrity. Use this skill when creating or editing form request classes, when validating API inputs, when implementing validation rules in controllers or services, when writing client-side validation for user experience, when sanitizing user
bio-tcr-bcr-analysis-scirpy-analysis
Analyze single-cell TCR and BCR data integrated with gene expression using scirpy. Use when working with 10x Genomics VDJ data alongside scRNA-seq or when integrating immune receptor information with cell state analysis.
analytics-tracking
Projete, audite e aprimore sistemas de rastreamento de análises para dados confiáveis e prontos para decisões. Esta skill auxilia na configuração, correção ou avaliação de rastreamento de análises (GA4, GTM, etc.), focando em estratégia de medição, qualidade do sinal e validação.
bio-rna-structure-structure-probing
Analyzes experimental RNA structure probing data from SHAPE-MaP and DMS-MaPseq experiments using ShapeMapper2. Converts mutation rates to per-nucleotide reactivity profiles that constrain structure prediction. Use when processing SHAPE-MaP or DMS-MaPseq sequencing data to obtain experimental RNA structure information.
xlsx
Use this skill any time a spreadsheet file is the primary input or output. This means any task where the user wants to: open, read, edit, or fix an existing .xlsx, .xlsm, .csv, or .tsv file (e.g., adding columns, computing formulas, formatting, charting, cleaning messy data); create a new spreadsheet from scratch or from other data sources; or convert between tabular file formats. Trigger especial
astropy
Uma biblioteca Python abrangente para astronomia e astrofísica, ideal para trabalhar com dados astronômicos, incluindo coordenadas celestes, unidades físicas, arquivos FITS, cálculos cosmológicos e análise de dados.
bio-workflows-rnaseq-to-de
End-to-end RNA-seq workflow from FASTQ files to differential expression results. Covers QC, quantification (Salmon or STAR+featureCounts), and DESeq2 analysis with visualization. Use when running RNA-seq from FASTQ to DE results.
bio-phasing-imputation-imputation-qc
Quality control of phasing and imputation results. Filter by INFO scores, assess accuracy, and prepare imputed data for downstream analysis. Use when filtering low-quality imputed variants or validating imputation accuracy before GWAS.
bio-alignment-msa-parsing
Parse and analyze multiple sequence alignments using Biopython. Extract sequences, identify conserved regions, analyze gaps, work with annotations, and manipulate alignment data for downstream analysis. Use when parsing or manipulating multiple sequence alignments.