Explorar skills

Python resource management with context managers, cleanup patterns, and streaming. Use when managing connections, file handles, implementing cleanup logic, or building streaming responses with accumulated state.

Read, write, and convert phylogenetic tree files using Biopython Bio.Phylo. Use when parsing Newick, Nexus, PhyloXML, or NeXML tree formats, converting between formats, or handling multiple trees.

Python code style, linting, formatting, naming conventions, and documentation standards. Use when writing new code, reviewing style, configuring linters, writing docstrings, or establishing project standards.

MCP Agent Mail - Mail-like coordination layer for multi-agent workflows. Identities, inbox/outbox, file reservations, contact policies, threaded messaging, pre-commit guard, Human Overseer, static exports, disaster recovery. Git+SQLite backed. Python/FastMCP.

O Azure Monitor OpenTelemetry Exporter para Python permite a exportação OpenTelemetry de baixo nível para o Application Insights.

Statistical models library for Python. Use when you need specific model classes (OLS, GLM, mixed models, ARIMA) with detailed diagnostics, residuals, and inference. Best for econometrics, time series, rigorous inference with coefficient tables. For guided statistical test selection with APA reporting use statistical-analysis.

Detect and remove doublets (multiple cells captured in one droplet) from single-cell RNA-seq data. Uses Scrublet (Python), DoubletFinder (R), and scDblFinder (R). Essential QC step before clustering to avoid artificial cell populations. Use when identifying and removing doublets from scRNA-seq data.

Create distributable Python packages with proper project structure, setup.py/pyproject.toml, and publishing to PyPI. Use when packaging Python libraries, creating CLI tools, or distributing Python code.

Creates bauplan data pipeline projects with SQL and Python models. Use when starting a new pipeline, defining DAG transformations, writing models, or setting up bauplan project structure from scratch.

Expert guidance for creating and working with marimo notebooks - reactive Python notebooks that can be executed as scripts and deployed as apps. Use when the user asks to create marimo notebooks, convert Jupyter notebooks to marimo, build interactive dashboards or data apps with marimo, work with marimo's reactive programming model, debug marimo notebooks, or needs help with marimo-specific featur

Guide for creating high-quality MCP (Model Context Protocol) servers that enable LLMs to interact with external services through well-designed tools. Use when building MCP servers to integrate external APIs or services, whether in Python (FastMCP) or Node/TypeScript (MCP SDK).

Python interface to OpenMS for mass spectrometry data analysis. Use for LC-MS/MS proteomics and metabolomics workflows including file handling (mzML, mzXML, mzTab, FASTA, pepXML, protXML, mzIdentML), signal processing, feature detection, peptide identification, and quantitative analysis. Apply when working with mass spectrometry data, analyzing proteomics experiments, or processing metabolomics da