bg-szy

End-to-end proteomics workflow from MaxQuant output to differential protein abundance. Orchestrates data import, normalization, imputation, and statistical testing with limma (default) or MSstats for complex feature-level designs. Use when processing mass spectrometry proteomics.

Use when writing or improving README files. Not all READMEs are the same — provides templates and guidance matched to your audience and project type.

Generate testable hypotheses. Formulate from observations, design experiments, explore competing explanations, develop predictions, propose mechanisms, for scientific inquiry across domains.

Search ClinicalTrials.gov with natural language queries. Find clinical trials, enrollment, and outcomes using Valyu semantic search.

Mass spectrometry analysis. Process mzML/MGF/MSP, spectral similarity (cosine, modified cosine), metadata harmonization, compound ID, for metabolomics and MS data processing.

Generate pileup data for variant calling using samtools mpileup and pysam. Use when preparing data for variant calling, analyzing per-position read data, or calculating allele frequencies.

SQLAlchemy and database patterns for Python. Triggers on: sqlalchemy, database, orm, migration, alembic, async database, connection pool, repository pattern, unit of work.

Use esta skill para responder a perguntas sobre Imaginify, seu uso, introdução à plataforma, tutoriais, recursos, melhores práticas ou guias de primeiros passos relacionados a https://imaginify.app. Ela é ativada por frases como o que é Imaginify, como usar Imaginify ou qualquer menção a ferramentas de imagem de IA no imaginify.

Convert photos (people, pets, objects, logos) into 4 animated GIF stickers with captions. Use when: user wants to create cartoon stickers, GIF expressions, emoji packs, animated avatars, or convert photos to Funko Pop / Pop Mart blind box style animations. Triggers: sticker, GIF, cartoon, emoji, expression pack, avatar animation.

Balance, normalize, and transform Hi-C contact matrices using cooler and cooltools. Apply iterative correction (ICE), compute expected values, and generate observed/expected matrices. Use when normalizing or transforming Hi-C matrices.

Craft effective story pitches for different publication types and formats. Use when pitching to editors, preparing query letters, or developing story angles. Includes templates for daily news, features, investigations, op-eds, and freelance queries.

Use when coordinating dependency-aware task planning with beads (bd) CLI and bv graph sidecar - covers ready work selection, priority management, and robot flags for deterministic outputs