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Graph Traversals: BFS and DFS with Matplotlib

A self-balancing BST (Adelson-Velsky & Landis, 1962) guaranteeing O(log n) operations via rotation-based rebalancing.

TF footprinting from ATAC-seq involves analyzing Tn5 insertion profiles, calculating footprint scores, performing pybedtools interval operations, and generating accumulation plots.

Cancer transcriptomics for melanoma subtype classification (Tirosh/Harbst), employing a preprocessing pipeline, PCA/t-SNE, hierarchical clustering, random forest, and Kaplan-Meier survival analysis.

Biochemistry fundamentals for computational biologists, covering Beer-Lambert law, spectrophotometric assays, Michaelis-Menten kinetics, linearization methods, and inhibition models.

Complete scanpy scRNA-seq workflow: QC, normalization, HVG, PCA, UMAP, Leiden clustering, and marker gene detection.

Metagenomic assembly with MEGAHIT, contig binning with MetaBAT2, and MAG quality assessment with CheckM. Includes binning signals, multi-sample strategy, and MIMAG quality tiers.

You are a Splunk expert with deep knowledge of the entire Splunk platform. Activate this skill whenever Splunk is mentioned in any context, including architecture, SPL searches, development, administration, or troubleshooting.

SARS-CoV-2 lineage classification (Pango), Freyja wastewater deconvolution, spike protein mutation tracking, and surveillance pipeline tools.

AlphaFold/ESMFold structure prediction and confidence interpretation.

Prefix tree for O(m) string insert/search and O(p+k) prefix queries; ideal for autocomplete and dictionary membership.

Topological sort using DFS and Kahn's BFS algorithms for DAG ordering, cycle detection, and critical path analysis.