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Infer and visualize intercellular communication from scRNA-seq with CellChat (R). Build CellChat from Seurat/counts → subset CellChatDB ligand-receptor pairs → over-expressed genes per group → communication probabilities → pathway signaling → network centrality (senders/receivers/influencers) → chord/heatmap/bubble plots → cross-condition compare. Human, mouse. Use liana for pure-Python.

Create and manipulate Seq, MutableSeq, and SeqRecord objects using Biopython. Use when creating sequences from strings, modifying sequence data in-place, or building annotated sequence records.

Interface Python unificada para mais de 40 serviços de bioinformática, ideal para consultar múltiplos bancos de dados (ex: UniProt, KEGG) em um único fluxo de trabalho com API consistente. É excelente para análise entre bancos de dados e mapeamento de IDs entre serviços.

Retrieve records from NCBI databases using Biopython Bio.Entrez. Use when downloading sequences, fetching GenBank records, getting document summaries, or parsing NCBI data into Biopython objects.

Security audit and vulnerability scanner for AI agent skills before installation. Use when: (1) evaluating a skill from an untrusted source, (2) auditing a skill directory or git repo URL for malicious code, (3) pre-install security gate for Claude Code plugins, OpenClaw skills, or Codex skills, (4) scanning Python scripts for dangerous patterns like os.system, eval, subprocess, network exfiltrati

Core Python library for astronomy and astrophysics workflows that need Astropy APIs, including units/quantities, coordinates, FITS I/O, tables, time systems, WCS, and cosmology. Use when implementing or debugging astronomical data analysis code with Astropy.

Security intelligence for code analysis. Detects SQL injection, XSS, CSRF, authentication issues, crypto failures, and more. Actions: scan, analyze, fix, audit, check, review, secure, validate, sanitize, protect. Languages: JavaScript, TypeScript, Python, PHP, Java, Go, Ruby. Frameworks: Express, Django, Flask, Laravel, Spring, Rails. Vulnerabilities: SQL injection, XSS, CSRF, authentication bypas

Chunked N-D arrays with compression and cloud storage. NumPy-style indexing. Backends: local, S3, GCS, ZIP, memory. Dask/Xarray integration for parallel and labeled computation. For lineage use lamindb; for labeled arrays use xarray.

Comprehensive software architecture skill for designing scalable, maintainable systems using ReactJS, NextJS, NodeJS, Express, React Native, Swift, Kotlin, Flutter, Postgres, GraphQL, Go, Python. Includes architecture diagram generation, system design patterns, tech stack decision frameworks, and dependency analysis. Use when designing system architecture, making technical decisions, creating arch

Read, write, and convert multiple sequence alignment files using Biopython Bio.AlignIO. Supports Clustal, PHYLIP, Stockholm, FASTA, Nexus, and other alignment formats for phylogenetics and conservation analysis. Use when reading, writing, or converting alignment file formats.

DNAnexus cloud genomics platform. Build apps/applets, manage data (upload/download), dxpy Python SDK, run workflows, FASTQ/BAM/VCF, for genomics pipeline development and execution.

O Azure Monitor OpenTelemetry Distro para Python permite a configuração de uma linha do Application Insights com auto-instrumentação.