Explorar skills

Plans and executes safe Convex schema and data migrations using the widen-migrate-narrow workflow and the @convex-dev/migrations component. Use this skill when a deployment fails schema validation, existing documents need backfilling, fields need adding or removing or changing type, tables need splitting or merging, or a zero-downtime migration strategy is needed. Also use when the user mentions b

Event-driven architecture — event/command taxonomy, Protobuf schemas, topic naming, mandatory outbox, partitioning, idempotency, DLQs, schema evolution. Broker-agnostic (NATS/Kafka/RabbitMQ). Use when designing event flows or auditing consistency.

Polish assemblies and call variants from Oxford Nanopore data using medaka. Uses neural networks trained on specific basecaller versions. Use when improving ONT-only assemblies or calling variants from Nanopore data without short-read polishing.

Advanced GitHub Actions workflow automation with AI swarm coordination, intelligent CI/CD pipelines, and comprehensive repository management

Infers person-to-person transmission from pathogen genomes using outbreaker2 (Campbell 2018), TransPhylo (Didelot 2017), phybreak (Klinkenberg 2017), BadTrIP (De Maio 2018), SCOTTI (De Maio 2016), BEASTLIER (Hall 2015), and SNP-distance / cluster-picker approaches (HIV-TRACE for HIV; transcluster). Defines outbreak clusters using pathogen-specific SNP thresholds (NOT a universal cutoff -- TB <=12

Web search and content extraction with Tavily and Exa via inference.sh CLI. Apps: Tavily Search, Tavily Extract, Exa Search, Exa Answer, Exa Extract. Capabilities: AI-powered search, content extraction, direct answers, research. Use for: research, RAG pipelines, fact-checking, content aggregation, agents. Triggers: web search, tavily, exa, search api, content extraction, research, internet search,

Annotate bacterial and archaeal genomes and plasmids with Bakta's Prodigal/HMM/diamond pipeline. Identifies CDS, ncRNA, tRNA, rRNA, tmRNA, sORFs, CRISPR arrays, oriC/oriV/oriT, and gaps against a curated UniRef-derived database. Produces NCBI-compatible GFF3, GenBank, EMBL, JSON, FASTA, TSV, and a circular genome plot. Use Prokka for legacy pipelines or non-bacterial kingdoms; PGAP for NCBI GenBan

Edit images with OpenAI GPT Image 2 (the `/edit` endpoint of ChatGPT Images 2.0) on RunComfy — bundled with the model's documented prompting patterns so the skill gets sharper output than naive prompting against the same model. Documents GPT Image Edit's strengths (preservation language, multilingual in-image text editing, multi-reference up to 10 images, layout / typography precision), the schema

"Validate protein designs using AlphaFold2 structure prediction. Use this skill when: (1) Validating designed sequences fold correctly, (2) Predicting binder-target complex structures, (3) Calculating confidence metrics (pLDDT, pTM, ipTM), (4) Self-consistency validation of designs, (5) Multi-chain complex prediction with AlphaFold-Multimer.

Use as ferramentas trace-mcp para navegação de código, análise de impacto e consultas cientes de frameworks, em vez de Read/Grep/Glob/Bash. Ative sempre que o agente precisar explorar, entender ou modificar uma base de código indexada por trace-mcp.

Persistent memory and context management for AI agents using OpenContext. Keep context across sessions/repos/dates, store conclusions, and provide document search workflows.

Build scalable design systems with Tailwind CSS, design tokens, component libraries, and responsive patterns. Use when creating component libraries, implementing design systems, or standardizing UI patterns.